A member of peptide transporter family, well characterised in higher vertebrates, was found in the intestine of the Antarctic waters haemoglobinless teleost Chionodraco hamatus (PepT-Ice; Maffia et al. J. Exp. Biol. 206:705, 2003). PepT-Ice shares high similarity to the low-affinity mammalian PepT1, but also possesses cold-adapted features. To better clarify the molecular basis of PepT-Ice evolutive adaptation, we studied its structural characteristics and tissue distribution. The full-length nucleotide sequence encoding for PepT-Ice was obtained by RT-PCR and 5’-/3’-RACE. PepT-Ice cDNA was 2509 bp long, with an orf of 2232 bp encoding for a putative protein of 743 amino acids. Hydropathy analysis predicted at least 12 potential transmembrane domains (TMD) with a large extracellular loop between TMD IX and X. Six putative extracellular N-glycosilation sites and nine and three intracellular consensus regions for protein kinase C and protein kinase A were identified. PepT-Ice exhibited higher percentage of identity with mammalian PepT1 (59-61%) than PepT2 (48-50%). Also, highest identity (69%) was found with zebrafish PepT1. Phylogenetic analysis clustered PepT-Ice to the PepT1 branch of the phylogenetic tree, In PepT-Ice, the presence of such hydrophobic amino acids as Gly-599, Leu-160 and Gly-271 in substitution of two Glu and one Asp, respectively, could play a relevant role in adaptive mechanisms to cold, possibly reducing intramolecular interaction and increasing protein flexibility. Using PepT-Ice specific primers, 630 bp RT-PCR amplification products were detected in mRNA extracted from C. hamatus intestine, kidney, liver, gills, brain and heart. The molecular characterization of PepT-Ice has been achieved that might elucidate the low temperature adaptation mechanisms of membrane transporters and functional relationships among vertebrate peptide transporters.
INTESTINAL PEPTIDE TRANSPORTER OF THE ANTARCTIC HAEMOGLOBINLESS TELEOST CHIONODRACO HAMATUS
MAFFIA, Michele;RIZZELLO, Antonia;ACIERNO, Raffaele;VERRI, Tiziano;STORELLI, Carlo
2006-01-01
Abstract
A member of peptide transporter family, well characterised in higher vertebrates, was found in the intestine of the Antarctic waters haemoglobinless teleost Chionodraco hamatus (PepT-Ice; Maffia et al. J. Exp. Biol. 206:705, 2003). PepT-Ice shares high similarity to the low-affinity mammalian PepT1, but also possesses cold-adapted features. To better clarify the molecular basis of PepT-Ice evolutive adaptation, we studied its structural characteristics and tissue distribution. The full-length nucleotide sequence encoding for PepT-Ice was obtained by RT-PCR and 5’-/3’-RACE. PepT-Ice cDNA was 2509 bp long, with an orf of 2232 bp encoding for a putative protein of 743 amino acids. Hydropathy analysis predicted at least 12 potential transmembrane domains (TMD) with a large extracellular loop between TMD IX and X. Six putative extracellular N-glycosilation sites and nine and three intracellular consensus regions for protein kinase C and protein kinase A were identified. PepT-Ice exhibited higher percentage of identity with mammalian PepT1 (59-61%) than PepT2 (48-50%). Also, highest identity (69%) was found with zebrafish PepT1. Phylogenetic analysis clustered PepT-Ice to the PepT1 branch of the phylogenetic tree, In PepT-Ice, the presence of such hydrophobic amino acids as Gly-599, Leu-160 and Gly-271 in substitution of two Glu and one Asp, respectively, could play a relevant role in adaptive mechanisms to cold, possibly reducing intramolecular interaction and increasing protein flexibility. Using PepT-Ice specific primers, 630 bp RT-PCR amplification products were detected in mRNA extracted from C. hamatus intestine, kidney, liver, gills, brain and heart. The molecular characterization of PepT-Ice has been achieved that might elucidate the low temperature adaptation mechanisms of membrane transporters and functional relationships among vertebrate peptide transporters.I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.